SNP Report

Basic Infomation

Name	rs6868218 dbSNP
Location	chr:5,130668123
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 41)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10035521	0.81[EUR][1000 genomes]
rs10042016	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10054370	0.93[EUR][1000 genomes]
rs10063968	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10077715	0.85[EUR][1000 genomes]
rs10478979	0.89[EUR][1000 genomes]
rs10478983	0.81[EUR][1000 genomes]
rs11951274	0.85[EUR][1000 genomes]
rs12109957	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12109963	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs3488	0.81[EUR][1000 genomes]
rs4277909	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6596013	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6596016	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6596017	0.89[EUR][1000 genomes]
rs6596022	0.81[EUR][1000 genomes]
rs6596023	0.81[EUR][1000 genomes]
rs6863990	0.96[EUR][1000 genomes]
rs6866768	0.85[EUR][1000 genomes]
rs6867201	0.85[EUR][1000 genomes]
rs6868645	0.81[EUR][1000 genomes]
rs6869961	0.89[EUR][1000 genomes]
rs6878583	0.81[EUR][1000 genomes]
rs6884108	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6884517	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6885947	0.89[EUR][1000 genomes]
rs6888325	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6888994	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6891125	0.81[EUR][1000 genomes]
rs6892016	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6897237	0.81[EUR][1000 genomes]
rs6897798	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs73249204	0.89[EUR][1000 genomes]
rs73249208	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7356708	0.89[EUR][1000 genomes]
rs7718039	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7726432	0.81[EUR][1000 genomes]
rs7728375	0.81[EUR][1000 genomes]
rs9285921	0.85[EUR][1000 genomes]
rs9327606	0.89[EUR][1000 genomes]
rs9327610	0.81[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CDC42SE2	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)