SNP Report

Basic Infomation

Name	rs10035521 dbSNP
Location	chr:5,130611183
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 47)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10042016	0.86[EUR][1000 genomes]
rs10044009	0.88[EUR][1000 genomes]
rs10052978	0.81[EUR][1000 genomes]
rs10054370	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10063968	0.87[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs10077715	0.88[EUR][1000 genomes]
rs10478979	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10478983	0.85[EUR][1000 genomes]
rs11951274	0.89[EUR][1000 genomes]
rs12109957	0.86[EUR][1000 genomes]
rs12109963	0.86[EUR][1000 genomes]
rs3488	0.85[EUR][1000 genomes]
rs4277909	0.89[EUR][1000 genomes]
rs58051717	0.81[EUR][1000 genomes]
rs59894268	0.80[EUR][1000 genomes]
rs6596013	0.92[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs6596016	0.89[EUR][1000 genomes]
rs6596017	0.84[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs6596018	0.81[EUR][1000 genomes]
rs6596022	0.85[EUR][1000 genomes]
rs6596023	0.85[EUR][1000 genomes]
rs6863990	0.84[EUR][1000 genomes]
rs6866768	0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6867201	0.82[EUR][1000 genomes]
rs6868218	0.81[EUR][1000 genomes]
rs6868645	0.87[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs6869961	0.83[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs6878583	0.85[EUR][1000 genomes]
rs6884108	0.83[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs6885947	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6888325	0.89[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs6888994	0.86[EUR][1000 genomes]
rs6891125	0.85[EUR][1000 genomes]
rs6892016	0.86[EUR][1000 genomes]
rs6897237	0.85[EUR][1000 genomes]
rs6897798	0.86[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs73249204	0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73249208	0.89[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs7356708	0.86[EUR][1000 genomes]
rs7713612	0.81[EUR][1000 genomes]
rs7718039	0.89[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs7726432	0.84[EUR][1000 genomes]
rs7728375	0.85[EUR][1000 genomes]
rs9285921	0.88[EUR][1000 genomes]
rs9327606	0.92[EUR][1000 genomes]
rs9327610	0.85[EUR][1000 genomes]
rs960428	0.81[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CDC42SE2	Distal transcriptional regulation
CDC42SE2	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)