SNP Report

Basic Infomation

Name	rs10044009 dbSNP
Location	chr:5,130768168
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 62)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10035521	0.88[EUR][1000 genomes]
rs10042016	0.82[EUR][1000 genomes]
rs10044196	0.80[EUR][1000 genomes]
rs10051738	0.80[EUR][1000 genomes]
rs10052978	0.92[EUR][1000 genomes]
rs10063129	0.80[EUR][1000 genomes]
rs10063968	0.89[EUR][1000 genomes]
rs10065412	0.80[EUR][1000 genomes]
rs10070400	0.80[EUR][1000 genomes]
rs10077153	0.80[EUR][1000 genomes]
rs10077715	0.85[EUR][1000 genomes]
rs10477732	0.88[EUR][1000 genomes]
rs10478979	0.89[EUR][1000 genomes]
rs10478983	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10478984	0.89[EUR][1000 genomes]
rs11951274	0.85[EUR][1000 genomes]
rs12109957	0.82[EUR][1000 genomes]
rs12109963	0.82[EUR][1000 genomes]
rs13360540	0.80[EUR][1000 genomes]
rs28550272	0.80[EUR][1000 genomes]
rs28843448	0.80[EUR][1000 genomes]
rs3488	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4277909	0.85[EUR][1000 genomes]
rs56831358	0.80[EUR][1000 genomes]
rs58051717	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6596013	0.89[EUR][1000 genomes]
rs6596016	0.85[EUR][1000 genomes]
rs6596017	0.89[EUR][1000 genomes]
rs6596018	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6596022	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6596023	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6863990	0.81[EUR][1000 genomes]
rs6866768	0.85[EUR][1000 genomes]
rs6868645	0.88[EUR][1000 genomes]
rs6869961	0.89[EUR][1000 genomes]
rs6872385	0.80[EUR][1000 genomes]
rs6873300	0.80[EUR][1000 genomes]
rs6877958	0.80[EUR][1000 genomes]
rs6878583	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6881343	0.80[EUR][1000 genomes]
rs6885947	0.89[EUR][1000 genomes]
rs6888325	0.89[EUR][1000 genomes]
rs6888994	0.82[EUR][1000 genomes]
rs6891125	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6892016	0.82[EUR][1000 genomes]
rs6894033	0.80[EUR][1000 genomes]
rs6897237	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6897798	0.89[EUR][1000 genomes]
rs6898777	0.80[EUR][1000 genomes]
rs73249204	0.89[EUR][1000 genomes]
rs73249208	0.89[EUR][1000 genomes]
rs7356708	0.82[EUR][1000 genomes]
rs7713612	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7718039	0.89[EUR][1000 genomes]
rs7726432	0.81[EUR][1000 genomes]
rs7728375	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7735957	0.88[EUR][1000 genomes]
rs9285921	0.85[EUR][1000 genomes]
rs9327606	0.89[EUR][1000 genomes]
rs9327610	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9327617	0.80[EUR][1000 genomes]
rs960428	0.92[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
RAPGEF6	RNA binding protein mediated regulation
FNIP1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)