SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 26)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10042016	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10054370	0.85[EUR][1000 genomes]
rs10063968	0.81[EUR][1000 genomes]
rs10478979	0.81[EUR][1000 genomes]
rs11951274	0.85[EUR][1000 genomes]
rs12109957	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12109963	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4277909	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6596013	0.81[EUR][1000 genomes]
rs6596016	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6596017	0.81[EUR][1000 genomes]
rs6863990	0.88[EUR][1000 genomes]
rs6867201	0.85[EUR][1000 genomes]
rs6868218	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6869961	0.81[EUR][1000 genomes]
rs6884108	0.92[EUR][1000 genomes]
rs6885947	0.81[EUR][1000 genomes]
rs6888325	0.81[EUR][1000 genomes]
rs6888994	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6892016	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6897798	0.81[EUR][1000 genomes]
rs73249204	0.81[EUR][1000 genomes]
rs73249208	0.81[EUR][1000 genomes]
rs7356708	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7718039	0.81[EUR][1000 genomes]
rs9327606	0.81[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CDC42SE2	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)