SNP Report
Basic Infomation
| Name | rs6760104 dbSNP |
|---|---|
| Location | chr:2,61304909 |
| Allele | A/G |
LD-proxy of rSNPs(r2>0.8) (count: 12)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs12464096 | 1.00[JPT][hapmap] |
| rs12988616 | 1.00[CHD][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];0.93[YRI][hapmap] |
| rs12996059 | 1.00[JPT][hapmap] |
| rs12998880 | 0.83[CHD][hapmap];1.00[JPT][hapmap] |
| rs13017457 | 1.00[JPT][hapmap] |
| rs3108630 | 0.93[YRI][hapmap] |
| rs35217978 | 1.00[CHD][hapmap];1.00[JPT][hapmap] |
| rs3732173 | 1.00[JPT][hapmap] |
| rs57618008 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs60829129 | 0.84[ASN][1000 genomes] |
| rs6545842 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs7577466 | 0.83[YRI][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| KIAA1841 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 5)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014