Home
Search
List search
Advanced Search
Data content
Tutorial
About Us
Feedback
rVarBase
SNP Report
Basic Infomation
Name
rs6545842  
dbSNP
Location
chr:2,61327542
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 10)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs12464096
1.00[JPT][hapmap]
rs12988616
1.00[JPT][hapmap]
rs12996059
1.00[JPT][hapmap]
rs12998880
1.00[JPT][hapmap]
rs13017457
1.00[JPT][hapmap]
rs35217978
1.00[JPT][hapmap]
rs3732173
1.00[JPT][hapmap]
rs60829129
0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6760104
1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7574718
1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
AHSA2
Distal transcriptional regulation
KIAA1841
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)