SNP Report

Basic Infomation

Name	rs6605060 dbSNP
Location	chr:1,923076
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 29)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs13302924	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2005437	1.00[EUR][1000 genomes]
rs2341362	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2489000	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2710867	0.83[EUR][1000 genomes]
rs2710869	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2710881	1.00[EUR][1000 genomes]
rs2799061	0.94[EUR][1000 genomes]
rs2799063	0.83[EUR][1000 genomes]
rs28394749	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28422907	0.91[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs28622096	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3121567	1.00[AMR][1000 genomes]
rs3121568	0.92[AMR][1000 genomes]
rs3128112	1.00[EUR][1000 genomes]
rs35002855	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35562283	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4970351	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4970403	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6605061	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs6662128	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6665000	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6671243	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6677020	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6677131	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9442609	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9442610	0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9777703	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9777939	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000217801	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)