SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 8)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11260566	0.84[CEU][hapmap];0.94[GIH][hapmap];0.85[TSI][hapmap]
rs12093154	0.84[CEU][hapmap];0.94[GIH][hapmap];0.85[TSI][hapmap]
rs2297864	0.84[CEU][hapmap];0.81[CHB][hapmap];0.94[GIH][hapmap];0.85[TSI][hapmap]
rs4567233	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6603783	0.84[CEU][hapmap];0.81[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs6657544	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6675798	0.81[CHB][hapmap];0.94[GIH][hapmap];0.92[TSI][hapmap]
rs6697886	0.83[ASW][hapmap];0.81[CHB][hapmap];0.94[GIH][hapmap];0.86[LWK][hapmap];0.92[YRI][hapmap]

rSNP related genes

Symbol	Regulation type
FAM132A	Proximal transcriptional regulation
RNF223	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 1)