SNP Report
Name | rs6514011   dbSNP |
---|---|
Location | chr:20,44182935 |
Allele | A/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs1005455 | 0.90[EUR][1000 genomes] |
rs12479541 | 0.98[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs12480391 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12480402 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12481030 | 0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12481362 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1569613 | 0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs1569614 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs1569615 | 0.97[EUR][1000 genomes] |
rs1569616 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs16990345 | 0.89[ASN][1000 genomes] |
rs17348421 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs17433181 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1977096 | 1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs2050095 | 0.90[EUR][1000 genomes] |
rs2064273 | 0.92[ASN][1000 genomes] |
rs2064274 | 0.92[ASN][1000 genomes] |
rs2231830 | 0.92[ASN][1000 genomes] |
rs2231832 | 0.92[ASN][1000 genomes] |
rs2231833 | 0.92[ASN][1000 genomes] |
rs2231834 | 0.92[ASN][1000 genomes] |
rs2231835 | 0.92[ASN][1000 genomes] |
rs2231836 | 0.92[ASN][1000 genomes] |
rs2231837 | 0.92[ASN][1000 genomes] |
rs2231838 | 0.89[ASN][1000 genomes] |
rs2231841 | 0.89[ASN][1000 genomes] |
rs2231844 | 0.89[ASN][1000 genomes] |
rs2250860 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2272956 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs2272957 | 0.89[ASN][1000 genomes] |
rs2294558 | 0.89[ASN][1000 genomes] |
rs2425722 | 0.90[EUR][1000 genomes] |
rs2868303 | 0.92[ASN][1000 genomes] |
rs2868304 | 0.98[AFR][1000 genomes];0.97[EUR][1000 genomes] |
rs2868305 | 0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs2868306 | 0.90[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs2868307 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs2868308 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs2868309 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs2903786 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs2903787 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs3091845 | 0.96[EUR][1000 genomes] |
rs3092506 | 0.95[EUR][1000 genomes] |
rs35051068 | 0.82[EUR][1000 genomes] |
rs3817887 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs4278989 | 0.92[ASN][1000 genomes] |
rs4302272 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs4810457 | 0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs4812908 | 0.89[ASN][1000 genomes] |
rs4812910 | 0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs4812911 | 0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs4812912 | 0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs55642155 | 0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs56312640 | 0.90[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs56366144 | 0.89[ASN][1000 genomes] |
rs57015374 | 0.92[ASN][1000 genomes] |
rs57094822 | 0.96[ASN][1000 genomes] |
rs57263161 | 0.92[ASN][1000 genomes] |
rs57700915 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs57911170 | 0.89[ASN][1000 genomes] |
rs58384175 | 0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs59279561 | 0.92[ASN][1000 genomes] |
rs6017600 | 0.89[ASN][1000 genomes] |
rs6017601 | 0.89[ASN][1000 genomes] |
rs6017602 | 0.85[ASN][1000 genomes] |
rs6017603 | 0.85[ASN][1000 genomes] |
rs6017604 | 0.85[ASN][1000 genomes] |
rs6017605 | 0.89[ASN][1000 genomes] |
rs6017606 | 0.92[ASN][1000 genomes] |
rs6017607 | 0.92[ASN][1000 genomes] |
rs6017608 | 0.92[ASN][1000 genomes] |
rs6017609 | 0.92[ASN][1000 genomes] |
rs6017610 | 0.92[ASN][1000 genomes] |
rs6017612 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6017613 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6017614 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6017615 | 0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6017616 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6017617 | 0.89[ASN][1000 genomes] |
rs6017618 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6017619 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6017620 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6017621 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6017625 | 0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6017626 | 0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6032281 | 0.89[ASN][1000 genomes] |
rs6032287 | 0.92[ASN][1000 genomes] |
rs6032288 | 0.92[ASN][1000 genomes] |
rs6032289 | 0.92[ASN][1000 genomes] |
rs6032290 | 0.92[ASN][1000 genomes] |
rs6032291 | 0.92[ASN][1000 genomes] |
rs6032293 | 0.92[ASN][1000 genomes] |
rs6032294 | 0.89[ASN][1000 genomes] |
rs6032295 | 0.92[ASN][1000 genomes] |
rs6032296 | 0.92[ASN][1000 genomes] |
rs6032300 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6032301 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6032302 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6032303 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6032305 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6032306 | 0.96[ASN][1000 genomes] |
rs6032307 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6032309 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6032310 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6032311 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6032312 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6032313 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6032314 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6032315 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6032316 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6032317 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6032318 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6032319 | 1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs6032321 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6032322 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6032323 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6032324 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6032325 | 0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6032327 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6032328 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6032332 | 0.89[ASN][1000 genomes] |
rs6032333 | 0.89[ASN][1000 genomes] |
rs6032334 | 0.89[ASN][1000 genomes] |
rs6032336 | 0.89[ASN][1000 genomes] |
rs6032339 | 0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6032340 | 0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6032342 | 0.89[ASN][1000 genomes] |
rs6032343 | 0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6094162 | 0.92[ASN][1000 genomes] |
rs6094163 | 0.92[ASN][1000 genomes] |
rs6094164 | 0.92[ASN][1000 genomes] |
rs6094165 | 0.92[ASN][1000 genomes] |
rs6094168 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6094173 | 0.98[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs6104200 | 0.89[ASN][1000 genomes] |
rs6104201 | 0.92[ASN][1000 genomes] |
rs6104203 | 0.92[ASN][1000 genomes] |
rs6104204 | 0.92[ASN][1000 genomes] |
rs6104205 | 0.92[ASN][1000 genomes] |
rs6104206 | 0.92[ASN][1000 genomes] |
rs6104207 | 0.92[ASN][1000 genomes] |
rs6104208 | 0.92[ASN][1000 genomes] |
rs6104211 | 0.92[ASN][1000 genomes] |
rs6104212 | 0.92[ASN][1000 genomes] |
rs6104214 | 0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6104218 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs6104222 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6104231 | 0.99[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs6104232 | 0.99[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs6104233 | 0.98[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs61438890 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs62205619 | 0.97[EUR][1000 genomes] |
rs62205623 | 0.98[EUR][1000 genomes] |
rs62205644 | 0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs62207162 | 0.97[EUR][1000 genomes] |
rs6514008 | 0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs6514009 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs6514010 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6514012 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs719996 | 0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs719997 | 0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs7263748 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs7264976 | 0.97[EUR][1000 genomes] |
rs7265026 | 0.99[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs7265308 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs7273669 | 0.96[EUR][1000 genomes] |
rs7274563 | 0.97[EUR][1000 genomes] |
rs7274685 | 0.99[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs7274789 | 0.93[EUR][1000 genomes] |
rs7347123 | 0.89[ASN][1000 genomes] |
rs7361329 | 0.92[ASN][1000 genomes] |
rs73908128 | 0.89[ASN][1000 genomes] |
rs73908129 | 0.89[ASN][1000 genomes] |
rs73908143 | 0.89[ASN][1000 genomes] |
rs73908145 | 0.89[ASN][1000 genomes] |
rs73908146 | 0.89[ASN][1000 genomes] |
rs73910225 | 0.92[ASN][1000 genomes] |
rs73910226 | 0.92[ASN][1000 genomes] |
rs8121615 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs8121640 | 0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs8122982 | 0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs932389 | 0.95[EUR][1000 genomes] |
rs988462 | 0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
RNA5SP485 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014