SNP Report
Name | rs6496710   dbSNP |
---|---|
Location | chr:15,91167883 |
Allele | A/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10520693 | 1.00[YRI][hapmap];0.82[AFR][1000 genomes] |
rs11638226 | 1.00[YRI][hapmap] |
rs11853399 | 1.00[AMR][1000 genomes] |
rs11857497 | 0.82[AFR][1000 genomes] |
rs16944572 | 1.00[AMR][1000 genomes] |
rs16944690 | 1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs28444914 | 0.82[AFR][1000 genomes] |
rs6496709 | 1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7164012 | 1.00[YRI][hapmap];0.92[AFR][1000 genomes] |
rs7170816 | 1.00[YRI][hapmap];0.89[AFR][1000 genomes] |
rs7179955 | 0.92[AFR][1000 genomes] |
rs7180298 | 1.00[YRI][hapmap];0.92[AFR][1000 genomes] |
rs7180658 | 0.92[AFR][1000 genomes] |
rs7180867 | 0.80[YRI][hapmap] |
rs7182084 | 1.00[YRI][hapmap];0.92[AFR][1000 genomes] |
rs7183489 | 0.89[AFR][1000 genomes] |
rs8027641 | 1.00[YRI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs8035823 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs8036822 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs8037259 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
Symbol | Regulation type |
---|---|
CRTC3 | Proximal transcriptional regulation |
ENSG00000259746 | Distal transcriptional regulation |
MAN2A2 | Distal transcriptional regulation |
ENSG00000259736 | RNA binding protein mediated regulation |
CRTC3 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014