SNP Report
Basic Infomation
| Name | rs61861443 dbSNP |
|---|---|
| Location | chr:10,81581619 |
| Allele | A/G |
LD-proxy of rSNPs(r2>0.8) (count: 16)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11199104 | 1.00[ASN][1000 genomes] |
| rs12241521 | 1.00[ASN][1000 genomes] |
| rs12256689 | 1.00[ASN][1000 genomes] |
| rs12262739 | 1.00[ASN][1000 genomes] |
| rs12269573 | 1.00[ASN][1000 genomes] |
| rs2478673 | 0.83[EUR][1000 genomes] |
| rs2983794 | 1.00[ASN][1000 genomes] |
| rs3012911 | 1.00[ASN][1000 genomes] |
| rs3012976 | 0.87[EUR][1000 genomes] |
| rs388901 | 0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes] |
| rs4933801 | 0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes] |
| rs4933929 | 0.85[EUR][1000 genomes] |
| rs60600341 | 1.00[ASN][1000 genomes] |
| rs61861440 | 0.91[AMR][1000 genomes];0.91[EUR][1000 genomes] |
| rs7095339 | 0.86[AMR][1000 genomes];0.82[EUR][1000 genomes] |
| rs7902160 | 1.00[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ENSG00000225484 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014