SNP Report
Basic Infomation
| Name | rs388901 dbSNP |
|---|---|
| Location | chr:10,81578367 |
| Allele | T/A |
LD-proxy of rSNPs(r2>0.8) (count: 18)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs1250990 | 1.00[ASN][1000 genomes] |
| rs1560013 | 1.00[ASN][1000 genomes] |
| rs1560014 | 1.00[ASN][1000 genomes] |
| rs1582884 | 1.00[ASN][1000 genomes] |
| rs1816229 | 1.00[ASN][1000 genomes] |
| rs1820624 | 1.00[ASN][1000 genomes] |
| rs1834879 | 1.00[ASN][1000 genomes] |
| rs2195226 | 1.00[ASN][1000 genomes] |
| rs2478673 | 0.81[EUR][1000 genomes] |
| rs3012976 | 0.89[EUR][1000 genomes] |
| rs35069776 | 1.00[ASN][1000 genomes] |
| rs35402965 | 1.00[ASN][1000 genomes] |
| rs4933801 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs4933929 | 0.82[EUR][1000 genomes] |
| rs4980094 | 1.00[ASN][1000 genomes] |
| rs61861440 | 0.91[AMR][1000 genomes];0.89[EUR][1000 genomes] |
| rs61861443 | 0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes] |
| rs7095339 | 0.86[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ENSG00000225484 | Proximal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014