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rVarBase
SNP Report
Basic Infomation
Name
rs1250990  
dbSNP
Location
chr:10,81356140
Allele
G/T
LD-proxy of rSNPs(r
2
>0.8) (count: 16)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs1427817
1.00[ASN][1000 genomes]
rs1560013
1.00[ASN][1000 genomes]
rs1560014
1.00[ASN][1000 genomes]
rs1582884
1.00[ASN][1000 genomes]
rs17883188
1.00[ASN][1000 genomes]
rs17884208
1.00[ASN][1000 genomes]
rs1816229
1.00[ASN][1000 genomes]
rs1820624
1.00[ASN][1000 genomes]
rs1834879
1.00[ASN][1000 genomes]
rs1975006
1.00[ASN][1000 genomes]
rs1975008
1.00[ASN][1000 genomes]
rs2195226
1.00[ASN][1000 genomes]
rs35069776
1.00[ASN][1000 genomes]
rs35402965
1.00[ASN][1000 genomes]
rs388901
1.00[ASN][1000 genomes]
rs4980094
1.00[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
SFTPA3P
Proximal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)