SNP Report

Basic Infomation

Name	rs61539002 dbSNP
Location	chr:12,49518348
Allele	T/A

LD-proxy of rSNPs(r²>0.8) (count: 15)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11168855	0.83[AMR][1000 genomes]
rs11168858	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs11168871	0.83[AMR][1000 genomes]
rs12298540	0.83[AMR][1000 genomes]
rs12301841	0.91[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs12308383	0.83[AMR][1000 genomes]
rs12309311	0.83[AMR][1000 genomes]
rs12311604	0.91[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs12314634	0.83[AMR][1000 genomes]
rs12314888	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs12318907	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs12320695	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs59178045	0.83[AMR][1000 genomes]
rs61557154	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs73304131	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)