SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 13)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1111750	0.93[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs16990964	0.96[ASN][1000 genomes]
rs16990971	0.96[ASN][1000 genomes]
rs1810322	0.98[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2297194	0.88[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs34240177	1.00[ASN][1000 genomes]
rs3848718	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6124760	1.00[ASN][1000 genomes]
rs6130967	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6130975	0.88[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6130976	0.88[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs6130977	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6130978	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
PCIF1	Distal transcriptional regulation
TNNC2	Distal transcriptional regulation
SNX21	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)