SNP Report

Basic Infomation

Name	rs6058585 dbSNP
Location	chr:20,30831981
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 57)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1006916	1.00[EUR][1000 genomes]
rs10485498	0.94[MKK][hapmap]
rs1407014	0.94[MKK][hapmap]
rs17123088	0.85[LWK][hapmap];1.00[MKK][hapmap];0.82[AFR][1000 genomes]
rs41288634	0.82[AFR][1000 genomes]
rs58400008	0.80[AFR][1000 genomes]
rs58436169	0.80[AFR][1000 genomes]
rs59745045	1.00[EUR][1000 genomes]
rs59859452	1.00[EUR][1000 genomes]
rs6057542	1.00[EUR][1000 genomes]
rs6057551	1.00[EUR][1000 genomes]
rs6057563	1.00[EUR][1000 genomes]
rs6057564	1.00[EUR][1000 genomes]
rs6057580	1.00[EUR][1000 genomes]
rs6057581	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs6057584	1.00[EUR][1000 genomes]
rs6058547	0.81[MKK][hapmap]
rs6058549	0.94[MKK][hapmap]
rs6058559	0.80[AFR][1000 genomes]
rs6058561	0.80[AFR][1000 genomes]
rs6058562	0.80[AFR][1000 genomes]
rs6058564	0.80[AFR][1000 genomes]
rs6058565	0.80[AFR][1000 genomes]
rs6058568	0.81[MKK][hapmap]
rs6058570	0.81[MKK][hapmap]
rs6058571	0.82[AFR][1000 genomes]
rs6058573	0.82[LWK][hapmap];1.00[MKK][hapmap];0.82[AFR][1000 genomes]
rs6058576	0.82[AFR][1000 genomes]
rs6058578	1.00[EUR][1000 genomes]
rs6058579	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6058580	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6058582	0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6058610	1.00[EUR][1000 genomes]
rs6058616	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs6058617	1.00[EUR][1000 genomes]
rs6058624	1.00[EUR][1000 genomes]
rs6058647	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs6058664	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs6058695	1.00[EUR][1000 genomes]
rs6058696	1.00[EUR][1000 genomes]
rs6058697	1.00[EUR][1000 genomes]
rs6061214	1.00[EUR][1000 genomes]
rs6061215	1.00[EUR][1000 genomes]
rs6061219	1.00[EUR][1000 genomes]
rs6061226	0.80[AFR][1000 genomes]
rs6061228	0.80[AFR][1000 genomes]
rs6061229	1.00[MKK][hapmap]
rs60907087	1.00[EUR][1000 genomes]
rs6579005	0.85[LWK][hapmap];1.00[MKK][hapmap];0.82[AFR][1000 genomes]
rs7271028	1.00[EUR][1000 genomes]
rs7273131	0.82[AFR][1000 genomes]
rs73237210	0.80[AFR][1000 genomes]
rs73237211	0.80[AFR][1000 genomes]
rs73244991	1.00[EUR][1000 genomes]
rs7348695	1.00[EUR][1000 genomes]
rs8116814	1.00[EUR][1000 genomes]
rs910185	1.00[TSI][hapmap]

rSNP related genes

Symbol	Regulation type
ENSG00000243952	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)