SNP Report
Basic Infomation
| Name | rs6017736 dbSNP |
|---|---|
| Location | chr:20,44734420 |
| Allele | A/G |
LD-proxy of rSNPs(r2>0.8) (count: 16)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11569301 | 1.00[EUR][1000 genomes] |
| rs11569315 | 1.00[MEX][hapmap] |
| rs12479871 | 0.80[MKK][hapmap] |
| rs2024569 | 1.00[MEX][hapmap];1.00[EUR][1000 genomes] |
| rs28763885 | 1.00[EUR][1000 genomes] |
| rs28763886 | 1.00[EUR][1000 genomes] |
| rs35342327 | 1.00[EUR][1000 genomes] |
| rs45568336 | 1.00[EUR][1000 genomes] |
| rs4812996 | 0.80[MKK][hapmap] |
| rs55919601 | 1.00[EUR][1000 genomes] |
| rs58539546 | 1.00[EUR][1000 genomes] |
| rs6032710 | 1.00[EUR][1000 genomes] |
| rs6094257 | 1.00[EUR][1000 genomes] |
| rs6104467 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs6104470 | 0.80[MKK][hapmap] |
| rs7270001 | 1.00[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| NCOA5 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014