SNP Report
Basic Infomation
| Name | rs57700693 dbSNP |
|---|---|
| Location | chr:5,130691066 |
| Allele | A/G |
LD-proxy of rSNPs(r2>0.8) (count: 64)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs1015557 | 1.00[EUR][1000 genomes] |
| rs1044402 | 1.00[EUR][1000 genomes] |
| rs11952538 | 1.00[EUR][1000 genomes] |
| rs11952747 | 1.00[EUR][1000 genomes] |
| rs11953301 | 1.00[EUR][1000 genomes] |
| rs12110164 | 1.00[EUR][1000 genomes] |
| rs17165972 | 1.00[EUR][1000 genomes] |
| rs17167499 | 1.00[EUR][1000 genomes] |
| rs17167682 | 1.00[EUR][1000 genomes] |
| rs17167683 | 1.00[EUR][1000 genomes] |
| rs4526097 | 1.00[EUR][1000 genomes] |
| rs55639617 | 1.00[EUR][1000 genomes] |
| rs55740493 | 1.00[EUR][1000 genomes] |
| rs55773458 | 0.91[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs55939271 | 1.00[EUR][1000 genomes] |
| rs56121529 | 1.00[EUR][1000 genomes] |
| rs56163891 | 1.00[EUR][1000 genomes] |
| rs56235343 | 1.00[EUR][1000 genomes] |
| rs56693198 | 1.00[EUR][1000 genomes] |
| rs56796052 | 1.00[EUR][1000 genomes] |
| rs57727293 | 1.00[EUR][1000 genomes] |
| rs60527956 | 1.00[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs60745360 | 1.00[EUR][1000 genomes] |
| rs60844708 | 1.00[EUR][1000 genomes] |
| rs61483560 | 1.00[EUR][1000 genomes] |
| rs6873136 | 1.00[EUR][1000 genomes] |
| rs6897210 | 1.00[EUR][1000 genomes] |
| rs6897507 | 1.00[EUR][1000 genomes] |
| rs6897639 | 1.00[EUR][1000 genomes] |
| rs73786615 | 1.00[EUR][1000 genomes] |
| rs73786622 | 1.00[EUR][1000 genomes] |
| rs73786624 | 1.00[EUR][1000 genomes] |
| rs73786625 | 1.00[EUR][1000 genomes] |
| rs73786634 | 1.00[EUR][1000 genomes] |
| rs73786638 | 1.00[EUR][1000 genomes] |
| rs73786639 | 1.00[EUR][1000 genomes] |
| rs73786643 | 0.91[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73786644 | 1.00[EUR][1000 genomes] |
| rs73786646 | 0.87[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73786648 | 0.91[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73786649 | 0.91[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73786650 | 0.91[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73786651 | 0.91[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73786652 | 0.87[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73786653 | 0.91[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73786654 | 0.91[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73786656 | 1.00[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73786659 | 1.00[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73786660 | 0.86[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73786665 | 1.00[EUR][1000 genomes] |
| rs73786668 | 1.00[EUR][1000 genomes] |
| rs73786670 | 1.00[EUR][1000 genomes] |
| rs73786672 | 1.00[EUR][1000 genomes] |
| rs73786678 | 1.00[EUR][1000 genomes] |
| rs73786680 | 1.00[EUR][1000 genomes] |
| rs73786681 | 1.00[EUR][1000 genomes] |
| rs73786687 | 1.00[EUR][1000 genomes] |
| rs73786689 | 1.00[EUR][1000 genomes] |
| rs73786692 | 1.00[EUR][1000 genomes] |
| rs73786694 | 1.00[EUR][1000 genomes] |
| rs73786695 | 1.00[EUR][1000 genomes] |
| rs73786696 | 1.00[EUR][1000 genomes] |
| rs73786697 | 1.00[EUR][1000 genomes] |
| rs73788703 | 1.00[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| CDC42SE2 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014