SNP Report

Basic Infomation

Name	rs504314 dbSNP
Location	chr:11,63781942
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 46)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10751004	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10792424	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10897464	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10897466	0.83[EUR][1000 genomes]
rs10897468	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11231653	0.82[EUR][1000 genomes]
rs11601228	0.86[EUR][1000 genomes]
rs11607028	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12790749	0.87[EUR][1000 genomes]
rs12798491	0.82[EUR][1000 genomes]
rs12808604	0.88[EUR][1000 genomes]
rs1386346	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1684950	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1783964	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2508584	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs3019782	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs320121	0.86[EUR][1000 genomes]
rs320156	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35492216	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3740636	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4426138	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs473243	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs481835	0.86[EUR][1000 genomes]
rs483340	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs487540	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs488082	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4980512	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4980516	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs499118	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs500493	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs502858	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs528927	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs529915	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs539432	0.86[EUR][1000 genomes]
rs553724	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs562865	0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs567386	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs578295	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6591830	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs709594	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs728919	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7928990	0.84[EUR][1000 genomes]
rs7938498	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7942318	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7951529	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs9943682	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
MACROD1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)