SNP Report
Basic Infomation
| Name | rs4812942 dbSNP |
|---|---|
| Location | chr:20,44253841 |
| Allele | C/T |
LD-proxy of rSNPs(r2>0.8) (count: 84)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10485456 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12479541 | 1.00[ASN][1000 genomes] |
| rs12479606 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12479752 | 1.00[ASN][1000 genomes] |
| rs12479783 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12479865 | 0.85[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12480155 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12480392 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12480626 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12480997 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12481374 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12481641 | 1.00[ASN][1000 genomes] |
| rs1487313 | 1.00[ASN][1000 genomes] |
| rs16990345 | 1.00[EUR][1000 genomes] |
| rs16990390 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs2064273 | 1.00[EUR][1000 genomes] |
| rs2064274 | 1.00[EUR][1000 genomes] |
| rs2231830 | 1.00[EUR][1000 genomes] |
| rs2231832 | 1.00[EUR][1000 genomes] |
| rs2231833 | 1.00[EUR][1000 genomes] |
| rs2231834 | 1.00[EUR][1000 genomes] |
| rs2231835 | 1.00[EUR][1000 genomes] |
| rs2231836 | 1.00[EUR][1000 genomes] |
| rs2231837 | 1.00[EUR][1000 genomes] |
| rs2231838 | 1.00[EUR][1000 genomes] |
| rs2231841 | 1.00[EUR][1000 genomes] |
| rs2231844 | 1.00[EUR][1000 genomes] |
| rs2294558 | 1.00[EUR][1000 genomes] |
| rs2868303 | 1.00[EUR][1000 genomes] |
| rs34621239 | 0.88[AMR][1000 genomes] |
| rs4278989 | 1.00[EUR][1000 genomes] |
| rs4608588 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs4812908 | 1.00[EUR][1000 genomes] |
| rs4812919 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs4812920 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs4812925 | 1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs4812941 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs4812951 | 1.00[ASN][1000 genomes] |
| rs4812956 | 1.00[ASN][1000 genomes] |
| rs57015374 | 1.00[EUR][1000 genomes] |
| rs57263161 | 1.00[EUR][1000 genomes] |
| rs59190933 | 0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs59279561 | 1.00[EUR][1000 genomes] |
| rs6017600 | 1.00[EUR][1000 genomes] |
| rs6017601 | 1.00[EUR][1000 genomes] |
| rs6017605 | 1.00[EUR][1000 genomes] |
| rs6017606 | 1.00[EUR][1000 genomes] |
| rs6017607 | 1.00[EUR][1000 genomes] |
| rs6017608 | 1.00[EUR][1000 genomes] |
| rs6017609 | 1.00[EUR][1000 genomes] |
| rs6017610 | 1.00[EUR][1000 genomes] |
| rs6032280 | 1.00[EUR][1000 genomes] |
| rs6032281 | 1.00[EUR][1000 genomes] |
| rs6032287 | 1.00[EUR][1000 genomes] |
| rs6032288 | 1.00[EUR][1000 genomes] |
| rs6032289 | 1.00[EUR][1000 genomes] |
| rs6032290 | 1.00[EUR][1000 genomes] |
| rs6032291 | 1.00[EUR][1000 genomes] |
| rs6032293 | 1.00[EUR][1000 genomes] |
| rs6032296 | 1.00[EUR][1000 genomes] |
| rs6094162 | 1.00[EUR][1000 genomes] |
| rs6094163 | 1.00[EUR][1000 genomes] |
| rs6094164 | 1.00[EUR][1000 genomes] |
| rs6094165 | 1.00[EUR][1000 genomes] |
| rs6094173 | 1.00[ASN][1000 genomes] |
| rs60996959 | 1.00[EUR][1000 genomes] |
| rs6104200 | 1.00[EUR][1000 genomes] |
| rs6104201 | 1.00[EUR][1000 genomes] |
| rs6104203 | 1.00[EUR][1000 genomes] |
| rs6104204 | 1.00[EUR][1000 genomes] |
| rs6104205 | 1.00[EUR][1000 genomes] |
| rs6104206 | 1.00[EUR][1000 genomes] |
| rs6104207 | 1.00[EUR][1000 genomes] |
| rs6104208 | 1.00[EUR][1000 genomes] |
| rs6104211 | 1.00[EUR][1000 genomes] |
| rs6104212 | 1.00[EUR][1000 genomes] |
| rs6104231 | 1.00[ASN][1000 genomes] |
| rs6104232 | 1.00[ASN][1000 genomes] |
| rs7265026 | 1.00[ASN][1000 genomes] |
| rs7274685 | 1.00[ASN][1000 genomes] |
| rs7347123 | 1.00[EUR][1000 genomes] |
| rs7361329 | 1.00[EUR][1000 genomes] |
| rs73910225 | 1.00[EUR][1000 genomes] |
| rs73910226 | 1.00[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| WFDC10A | Proximal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014