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rVarBase
SNP Report
Basic Infomation
Name
rs4671400  
dbSNP
Location
chr:2,61472632
Allele
A/G
LD-proxy of rSNPs(r
2
>0.8) (count: 5)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs1177227
1.00[AFR][1000 genomes]
rs1177279
1.00[ASW][hapmap]
rs1177287
1.00[ASW][hapmap]
rs1809028
1.00[ASW][hapmap]
rs62151044
1.00[AFR][1000 genomes]
rSNP related genes
Symbol
Regulation type
USP34
Proximal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 4)
eQTL related gene
Source
AHSA2
Pritchard
MDH1
SCAN
LOC339803
SCAN
TECTB
SCAN