SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 13)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12613301	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17026654	0.93[CEU][hapmap];0.89[EUR][1000 genomes]
rs17026782	1.00[YRI][hapmap]
rs1978330	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3771196	1.00[YRI][hapmap]
rs3917225	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3917243	0.86[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs4851000	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4851544	0.93[CEU][hapmap];0.89[EUR][1000 genomes]
rs4851546	0.89[EUR][1000 genomes]
rs4851547	0.96[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6733727	1.00[YRI][hapmap]
rs7580384	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
IL1R1	Distal transcriptional regulation
IL1R1	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)