SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12613301	0.94[EUR][1000 genomes]
rs1978330	0.94[AFR][1000 genomes]
rs3917225	0.92[CEU][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs3917239	0.93[CEU][hapmap];0.89[EUR][1000 genomes]
rs4851000	0.94[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs4851544	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4851546	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4851547	0.96[CEU][hapmap];0.95[EUR][1000 genomes]
rs7580384	0.96[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
IL1R1	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)