SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10800755	0.82[CEU][hapmap]
rs10800756	0.82[CEU][hapmap]
rs12029212	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs12032370	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs12139527	0.87[CHB][hapmap];0.90[JPT][hapmap]
rs12140231	0.80[JPT][hapmap]
rs2279944	0.93[CHB][hapmap];1.00[JPT][hapmap]
rs2297905	0.94[CHB][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs3767498	0.82[CEU][hapmap];0.84[MEX][hapmap]
rs3861928	0.82[CEU][hapmap];0.84[MEX][hapmap]
rs4915473	0.96[CEU][hapmap];0.89[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CACNA1S	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)