SNP Report
Name | rs3767512   dbSNP |
---|---|
Location | chr:1,201052283 |
Allele | G/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10920106 | 0.85[CHB][hapmap] |
rs11811602 | 0.86[CHB][hapmap] |
rs2297913 | 1.00[AFR][1000 genomes] |
rs34754698 | 1.00[AFR][1000 genomes] |
rs3767506 | 0.85[CHB][hapmap];0.81[ASN][1000 genomes] |
rs3767507 | 0.85[CHB][hapmap];0.81[ASN][1000 genomes] |
rs4915477 | 0.86[CHB][hapmap] |
rs56236174 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs57511066 | 0.93[ASN][1000 genomes] |
rs6664806 | 0.88[ASN][1000 genomes] |
rs6667959 | 0.93[CHB][hapmap];0.82[CHD][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes] |
rs734879 | 0.93[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes] |
rs734880 | 0.91[ASN][1000 genomes] |
rs734881 | 0.92[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes] |
rs7516825 | 0.92[ASN][1000 genomes] |
rs7539618 | 0.93[CHB][hapmap];0.82[CHD][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes] |
rs942705 | 0.93[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes] |
rs942706 | 0.93[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
CACNA1S | Distal transcriptional regulation |
ASCL5 | Distal transcriptional regulation |
CACNA1S | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014