SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12768957	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12770472	0.84[EUR][1000 genomes]
rs12770500	0.84[EUR][1000 genomes]
rs17617406	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs17679603	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2343302	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2880599	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs35436409	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs35671072	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs35828718	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7074356	0.97[EUR][1000 genomes]
rs7097080	0.89[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
FAM213A	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)