SNP Report

Basic Infomation

Name	rs34761 dbSNP
Location	chr:5,96153624
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 34)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs149431	0.97[AFR][1000 genomes];0.99[EUR][1000 genomes]
rs149482	0.90[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs149544	0.97[AFR][1000 genomes];0.97[EUR][1000 genomes]
rs151908	0.90[CHB][hapmap];0.91[YRI][hapmap];0.98[AFR][1000 genomes];0.99[EUR][1000 genomes]
rs151909	0.96[AFR][1000 genomes];0.99[EUR][1000 genomes]
rs151910	0.97[AFR][1000 genomes];0.99[EUR][1000 genomes]
rs151911	0.94[CHB][hapmap];0.95[YRI][hapmap];0.97[AFR][1000 genomes];0.99[EUR][1000 genomes]
rs151953	0.90[CHB][hapmap];0.90[YRI][hapmap];0.97[AFR][1000 genomes];0.99[EUR][1000 genomes]
rs151954	0.97[AFR][1000 genomes];0.99[EUR][1000 genomes]
rs152280	0.86[YRI][hapmap]
rs193482	0.96[AFR][1000 genomes];0.97[EUR][1000 genomes]
rs26653	0.91[EUR][1000 genomes]
rs26654	0.92[EUR][1000 genomes]
rs26655	0.92[EUR][1000 genomes]
rs27527	0.90[YRI][hapmap]
rs28129	0.90[CHB][hapmap];0.90[YRI][hapmap];0.98[AFR][1000 genomes];0.99[EUR][1000 genomes]
rs34750	0.92[EUR][1000 genomes]
rs34751	0.93[EUR][1000 genomes]
rs34752	0.92[EUR][1000 genomes]
rs34753	0.90[CHB][hapmap];0.95[YRI][hapmap];0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs34755	0.85[CHB][hapmap]
rs34756	0.90[CHB][hapmap];0.95[YRI][hapmap];0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs34757	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs34759	0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs34760	0.97[AFR][1000 genomes];0.99[EUR][1000 genomes]
rs34762	0.98[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs34764	0.98[AFR][1000 genomes];0.99[EUR][1000 genomes]
rs35134	0.90[CHB][hapmap];0.99[EUR][1000 genomes]
rs40090	0.85[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs40091	0.98[AFR][1000 genomes];0.99[EUR][1000 genomes]
rs40604	0.90[CHB][hapmap];0.90[YRI][hapmap];0.98[AFR][1000 genomes];0.99[EUR][1000 genomes]
rs42443	0.98[AFR][1000 genomes];0.99[EUR][1000 genomes]
rs468130	0.90[CHB][hapmap];0.91[YRI][hapmap];0.98[AFR][1000 genomes];0.98[EUR][1000 genomes]
rs695965	0.94[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ERAP1	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)