SNP Report
Name | rs3121556   dbSNP |
---|---|
Location | chr:1,961827 |
Allele | G/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs2465129 | 0.81[EUR][1000 genomes] |
rs2465130 | 0.81[EUR][1000 genomes] |
rs2488993 | 0.81[EUR][1000 genomes] |
rs2488994 | 0.83[EUR][1000 genomes] |
rs2710870 | 0.95[EUR][1000 genomes] |
rs2710875 | 0.80[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs2710876 | 0.82[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs2799055 | 0.81[EUR][1000 genomes] |
rs3121578 | 0.86[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs3121579 | 0.81[EUR][1000 genomes] |
rs3128099 | 0.88[ASN][1000 genomes] |
rs3128102 | 0.88[ASN][1000 genomes] |
rs3813192 | 0.88[ASN][1000 genomes] |
rs4970344 | 0.88[EUR][1000 genomes] |
rs9331224 | 0.81[EUR][1000 genomes] |
rs9331225 | 0.82[ASN][1000 genomes] |
rs9697293 | 0.88[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
AGRN | Distal transcriptional regulation |
SDF4 | Distal transcriptional regulation |
B3GALT6 | Distal transcriptional regulation |
UBE2J2 | Distal transcriptional regulation |
SCNN1D | Distal transcriptional regulation |
HES4 | Distal transcriptional regulation |
RNF223 | Distal transcriptional regulation |
AGRN | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014