SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 10)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10920189	0.87[CHB][hapmap];0.81[JPT][hapmap]
rs2719183	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2719185	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2799674	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4128458	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4606345	0.82[CEU][hapmap];0.95[CHB][hapmap];0.89[CHD][hapmap];0.86[GIH][hapmap];0.81[ASN][1000 genomes]
rs4915230	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6703957	0.81[CHB][hapmap]
rs947485	0.82[JPT][hapmap]
rs947486	0.83[CHB][hapmap]

rSNP related genes

Symbol	Regulation type
LAD1	Proximal transcriptional regulation
TNNI1	Distal transcriptional regulation
TNNT2	Distal transcriptional regulation
LAD1	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 3)