SNP Report

Basic Infomation

Name	rs2468943 dbSNP
Location	chr:12,48747249
Allele	T/G

LD-proxy of rSNPs(r²>0.8) (count: 34)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1061986	0.92[EUR][1000 genomes]
rs1107654	0.88[CEU][hapmap];0.88[GIH][hapmap];0.84[TSI][hapmap];0.82[EUR][1000 genomes]
rs1489108	0.86[EUR][1000 genomes]
rs2054905	0.88[CEU][hapmap];0.82[EUR][1000 genomes]
rs2409003	0.88[EUR][1000 genomes]
rs2409004	0.88[EUR][1000 genomes]
rs2450994	0.96[CEU][hapmap];0.93[GIH][hapmap];0.89[TSI][hapmap];0.88[EUR][1000 genomes]
rs2634676	0.92[EUR][1000 genomes]
rs2634678	0.92[EUR][1000 genomes]
rs2634680	0.92[EUR][1000 genomes]
rs2634681	0.96[CEU][hapmap];0.93[GIH][hapmap];0.89[TSI][hapmap];0.91[EUR][1000 genomes]
rs2634682	0.91[EUR][1000 genomes]
rs2634684	0.96[CEU][hapmap];0.93[GIH][hapmap];0.89[TSI][hapmap];0.91[EUR][1000 genomes]
rs2634686	0.88[EUR][1000 genomes]
rs2634688	0.85[EUR][1000 genomes]
rs2634689	0.86[EUR][1000 genomes]
rs2732441	0.96[CEU][hapmap];0.88[EUR][1000 genomes]
rs2732448	0.96[CEU][hapmap];0.93[GIH][hapmap];0.89[TSI][hapmap];0.90[EUR][1000 genomes]
rs2732453	0.87[EUR][1000 genomes]
rs2732454	0.87[EUR][1000 genomes]
rs2732457	0.96[CEU][hapmap];0.93[GIH][hapmap];0.93[TSI][hapmap];0.92[EUR][1000 genomes]
rs2732461	0.87[CEU][hapmap]
rs2732462	0.83[EUR][1000 genomes]
rs2732466	0.96[CEU][hapmap];0.93[GIH][hapmap];0.89[TSI][hapmap];0.91[EUR][1000 genomes]
rs2732479	0.92[EUR][1000 genomes]
rs2732480	0.88[GIH][hapmap]
rs2732481	0.96[CEU][hapmap];0.93[GIH][hapmap];0.89[TSI][hapmap];0.92[EUR][1000 genomes]
rs2732484	0.96[CEU][hapmap];0.93[GIH][hapmap];0.89[TSI][hapmap];0.92[EUR][1000 genomes]
rs2732486	0.85[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs7297824	0.88[CEU][hapmap]
rs7315820	0.88[CEU][hapmap];0.88[GIH][hapmap];0.84[TSI][hapmap]
rs7486941	0.81[GIH][hapmap]
rs7487682	0.81[GIH][hapmap]
rs923397	0.96[CEU][hapmap];0.93[GIH][hapmap];0.89[TSI][hapmap];0.88[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ZNF641	Proximal transcriptional regulation
ENSG00000258273	Distal transcriptional regulation
ENSG00000269514	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)