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rVarBase
SNP Report
Basic Infomation
Name
rs242614  
dbSNP
Location
chr:20,30675676
Allele
A/G
LD-proxy of rSNPs(r
2
>0.8) (count: 15)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs17259459
0.94[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs242600
0.96[EUR][1000 genomes]
rs242605
0.90[EUR][1000 genomes]
rs242610
0.93[EUR][1000 genomes]
rs242612
0.81[EUR][1000 genomes]
rs242613
0.80[EUR][1000 genomes]
rs242615
0.81[EUR][1000 genomes]
rs57144947
0.93[EUR][1000 genomes]
rs6061152
0.88[EUR][1000 genomes]
rs6061154
0.91[EUR][1000 genomes]
rs6089170
0.81[EUR][1000 genomes]
rs6121337
0.80[EUR][1000 genomes]
rs926687
0.80[EUR][1000 genomes]
rs926688
0.80[EUR][1000 genomes]
rs980368
0.80[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
HCK
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)