SNP Report

Basic Infomation

Name	rs242547 dbSNP
Location	chr:20,31418581
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs242528	0.84[EUR][1000 genomes]
rs242536	0.84[EUR][1000 genomes]
rs242538	0.84[EUR][1000 genomes]
rs242540	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs242544	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs242548	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs242551	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs404543	0.83[EUR][1000 genomes]
rs66499347	0.85[EUR][1000 genomes]
rs853849	0.80[EUR][1000 genomes]
rs853853	0.84[EUR][1000 genomes]
rs853859	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)