SNP Report

Basic Infomation

Name	rs240569 dbSNP
Location	chr:11,64733678
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 42)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10792454	0.92[ASN][1000 genomes]
rs11231912	0.99[ASN][1000 genomes]
rs1152642	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1196617	0.94[ASN][1000 genomes]
rs1196618	0.94[ASN][1000 genomes]
rs1196903	0.82[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.94[ASN][1000 genomes]
rs12226283	0.87[ASN][1000 genomes]
rs183578	0.87[CEU][hapmap];0.86[CHB][hapmap];0.89[JPT][hapmap];0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs183579	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs240568	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs240570	0.82[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs2670909	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs471772	0.90[ASN][1000 genomes]
rs484182	0.81[CHB][hapmap]
rs495330	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.90[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs528941	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[JPT][hapmap];1.00[ASN][1000 genomes]
rs532508	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs534236	0.81[CHB][hapmap]
rs551292	1.00[CHB][hapmap];0.90[JPT][hapmap];0.92[ASN][1000 genomes]
rs57751380	0.89[ASN][1000 genomes]
rs582378	0.90[ASN][1000 genomes]
rs582580	1.00[CHB][hapmap];0.95[CHD][hapmap];0.90[JPT][hapmap];0.91[ASN][1000 genomes]
rs586616	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[JPT][hapmap];0.80[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs587835	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs589351	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs596321	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[JPT][hapmap];0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs600868	0.90[ASN][1000 genomes]
rs602404	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[JPT][hapmap];0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs610208	0.95[ASN][1000 genomes]
rs615502	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs615709	1.00[CEU][hapmap];1.00[CHB][hapmap];0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs616124	0.89[ASN][1000 genomes]
rs616341	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs631012	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs650506	0.81[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];0.90[JPT][hapmap];0.89[ASN][1000 genomes]
rs654772	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[JPT][hapmap];0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6591869	0.81[CHB][hapmap]
rs660165	1.00[CHB][hapmap];0.90[JPT][hapmap];0.90[ASN][1000 genomes]
rs663767	0.88[CHB][hapmap];0.81[JPT][hapmap]
rs664226	1.00[CHB][hapmap];0.91[CHD][hapmap];0.90[JPT][hapmap];0.90[ASN][1000 genomes]
rs674981	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.90[JPT][hapmap];0.94[ASN][1000 genomes]
rs694907	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
C11orf85	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)