SNP Report
Basic Infomation
| Name | rs225093 dbSNP |
|---|---|
| Location | chr:1,8040177 |
| Allele | T/C |
LD-proxy of rSNPs(r2>0.8) (count: 16)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs12563704 | 0.90[ASN][1000 genomes] |
| rs161800 | 0.91[ASN][1000 genomes] |
| rs161802 | 0.91[ASN][1000 genomes] |
| rs225092 | 0.91[ASN][1000 genomes] |
| rs225100 | 0.82[ASN][1000 genomes] |
| rs225119 | 0.91[ASN][1000 genomes] |
| rs225120 | 0.91[ASN][1000 genomes] |
| rs225123 | 0.81[AMR][1000 genomes];0.90[ASN][1000 genomes] |
| rs226242 | 0.91[ASN][1000 genomes] |
| rs226248 | 0.82[ASN][1000 genomes] |
| rs226251 | 0.86[ASN][1000 genomes] |
| rs226253 | 0.85[ASN][1000 genomes] |
| rs2641116 | 0.81[ASN][1000 genomes] |
| rs367481 | 0.92[ASN][1000 genomes] |
| rs379920 | 0.82[ASN][1000 genomes] |
| rs72854902 | 0.91[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| PARK7 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014