SNP Report

Basic Infomation

Name	rs2244780 dbSNP
Location	chr:12,40574969
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 19)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1388585	0.85[YRI][hapmap]
rs2244534	1.00[YRI][hapmap];0.90[AFR][1000 genomes]
rs2253171	0.85[YRI][hapmap]
rs2638235	1.00[YRI][hapmap];0.90[AFR][1000 genomes]
rs2638240	0.90[AFR][1000 genomes]
rs2638241	1.00[YRI][hapmap];0.90[AFR][1000 genomes]
rs2638242	0.81[AFR][1000 genomes]
rs2638243	1.00[YRI][hapmap];0.90[AFR][1000 genomes]
rs2638261	0.85[YRI][hapmap];0.90[AFR][1000 genomes]
rs2638265	0.85[YRI][hapmap];0.90[AFR][1000 genomes]
rs2708403	1.00[YRI][hapmap];0.90[AFR][1000 genomes]
rs2708405	1.00[YRI][hapmap];0.90[AFR][1000 genomes]
rs2708406	1.00[YRI][hapmap];0.90[AFR][1000 genomes]
rs2708416	1.00[YRI][hapmap];0.90[AFR][1000 genomes]
rs2708461	0.85[YRI][hapmap]
rs2708471	0.90[AFR][1000 genomes]
rs2708475	0.85[YRI][hapmap];0.90[AFR][1000 genomes]
rs2708483	0.90[AFR][1000 genomes]
rs2708484	0.85[YRI][hapmap];0.83[AFR][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)