SNP Report
Basic Infomation
| Name | rs2638242 dbSNP |
|---|---|
| Location | chr:12,40573868 |
| Allele | C/G |
LD-proxy of rSNPs(r2>0.8) (count: 16)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs2244534 | 0.90[AFR][1000 genomes] |
| rs2244780 | 0.81[AFR][1000 genomes] |
| rs2638235 | 0.90[AFR][1000 genomes] |
| rs2638240 | 0.90[AFR][1000 genomes] |
| rs2638241 | 0.90[AFR][1000 genomes] |
| rs2638243 | 0.90[AFR][1000 genomes] |
| rs2638261 | 0.90[AFR][1000 genomes] |
| rs2638265 | 0.90[AFR][1000 genomes] |
| rs2708403 | 0.90[AFR][1000 genomes] |
| rs2708405 | 0.90[AFR][1000 genomes] |
| rs2708406 | 0.90[AFR][1000 genomes] |
| rs2708416 | 0.90[AFR][1000 genomes] |
| rs2708471 | 0.90[AFR][1000 genomes] |
| rs2708475 | 0.90[AFR][1000 genomes] |
| rs2708483 | 0.90[AFR][1000 genomes] |
| rs2708484 | 0.83[AFR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| LRRK2 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014