SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs3171845	0.87[CEU][hapmap];0.92[EUR][1000 genomes]
rs34722443	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs35918372	0.82[EUR][1000 genomes]
rs3917289	0.86[CEU][hapmap];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs3917299	1.00[CEU][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3917329	1.00[CEU][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4851551	0.82[CEU][hapmap];0.97[EUR][1000 genomes]
rs4851552	0.97[EUR][1000 genomes]
rs4851553	0.88[EUR][1000 genomes]
rs4851561	0.86[AMR][1000 genomes]
rs62151687	0.86[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs62156407	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
IL1R1	Proximal transcriptional regulation
IL1R2	Distal transcriptional regulation
IL1R1	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)