SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 7)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1050922	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.86[YRI][hapmap];0.82[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs10750951	0.82[AMR][1000 genomes]
rs2074230	0.86[JPT][hapmap]
rs2074231	0.97[ASN][1000 genomes]
rs2074232	0.97[ASN][1000 genomes]
rs2905517	0.95[GIH][hapmap];0.90[MEX][hapmap];0.82[TSI][hapmap];0.91[AMR][1000 genomes]
rs4939488	0.80[LWK][hapmap];0.86[YRI][hapmap]

rSNP related genes

Symbol	Regulation type
CD6	Proximal transcriptional regulation
CD6	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 4)