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rVarBase
SNP Report
Basic Infomation
Name
rs2074232  
dbSNP
Location
chr:11,60785038
Allele
A/G
LD-proxy of rSNPs(r
2
>0.8) (count: 7)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs1050922
0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2074229
0.97[ASN][1000 genomes]
rs2074231
0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3019558
0.96[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4939488
0.84[AFR][1000 genomes]
rs7937064
0.83[AFR][1000 genomes]
rs7937068
0.85[AFR][1000 genomes]
rSNP related genes
Symbol
Regulation type
CD6
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)