SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 22)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1476586	0.85[AMR][1000 genomes]
rs1859302	0.85[AMR][1000 genomes]
rs2079211	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2158358	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2244814	0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2247048	0.85[AMR][1000 genomes]
rs2525521	0.85[AMR][1000 genomes]
rs2525522	0.83[AMR][1000 genomes]
rs2525523	0.85[AMR][1000 genomes]
rs2525524	0.85[AMR][1000 genomes]
rs2525525	0.85[AMR][1000 genomes]
rs2525526	0.85[AMR][1000 genomes]
rs2525527	0.83[AMR][1000 genomes]
rs2525530	0.86[ASN][1000 genomes]
rs2842325	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2842328	0.88[ASN][1000 genomes]
rs2842329	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2842331	0.85[AMR][1000 genomes]
rs2842338	0.81[AMR][1000 genomes]
rs757370	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs916962	0.85[AMR][1000 genomes]
rs929285	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ZFP36L1	Distal transcriptional regulation
RAD51B	Distal transcriptional regulation
RAD51B	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)