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rVarBase
SNP Report
Basic Infomation
Name
rs2005285  
dbSNP
Location
chr:2,61481090
Allele
A/G
LD-proxy of rSNPs(r
2
>0.8) (count: 8)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10169482
0.84[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs12999245
0.80[ASN][1000 genomes]
rs2123112
0.86[ASN][1000 genomes]
rs2600670
0.83[ASN][1000 genomes]
rs6545846
0.88[ASN][1000 genomes]
rs6737373
0.81[AMR][1000 genomes]
rs68020555
0.88[AMR][1000 genomes]
rs7583383
0.83[AMR][1000 genomes]
rSNP related genes
Symbol
Regulation type
USP34
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)