SNP Report

Basic Infomation

Name	rs1961243 dbSNP
Location	chr:2,65370613
Allele	A/C

LD-proxy of rSNPs(r²>0.8) (count: 34)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10165691	0.82[ASN][1000 genomes]
rs10187798	0.81[ASN][1000 genomes]
rs1019303	0.82[ASN][1000 genomes]
rs1019305	0.82[ASN][1000 genomes]
rs10195328	0.81[ASN][1000 genomes]
rs10496122	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10519011	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11126030	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11885480	0.82[ASN][1000 genomes]
rs12172885	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12472234	0.82[ASN][1000 genomes]
rs12611491	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12617149	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12618283	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12619806	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12623206	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12713529	0.81[ASN][1000 genomes]
rs13012648	0.92[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1558659	0.82[ASN][1000 genomes]
rs1558660	0.82[ASN][1000 genomes]
rs17040051	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2227268	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2241140	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2241158	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs34374525	0.82[ASN][1000 genomes]
rs3732098	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs3771105	0.81[ASN][1000 genomes]
rs4671115	0.81[ASN][1000 genomes]
rs61758848	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6725335	0.81[ASN][1000 genomes]
rs6741843	0.81[ASN][1000 genomes]
rs6757520	0.82[ASN][1000 genomes]
rs950736	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9784118	0.81[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ACTR2	Distal transcriptional regulation
RAB1A	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)