SNP Report

Basic Infomation

Name	rs190577 dbSNP
Location	chr:2,65496144
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 31)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10116	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11677340	0.83[ASN][1000 genomes]
rs12104748	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12463661	0.89[ASN][1000 genomes]
rs12467321	0.85[ASN][1000 genomes]
rs1547970	0.82[ASN][1000 genomes]
rs17038564	0.96[ASN][1000 genomes]
rs2160263	0.82[AMR][1000 genomes]
rs268850	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs268853	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs268855	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs268857	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs268861	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs268862	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs268863	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs268864	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs268867	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs268868	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs268870	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs268871	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs268873	0.89[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs268875	0.86[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs268878	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3771098	0.82[ASN][1000 genomes]
rs3771099	0.89[ASN][1000 genomes]
rs3821185	0.82[ASN][1000 genomes]
rs60726151	0.85[ASN][1000 genomes]
rs60955726	0.89[ASN][1000 genomes]
rs7558347	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7564659	0.83[ASN][1000 genomes]
rs7574628	0.90[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ACTR2	Proximal transcriptional regulation
ACTR2	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)