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rVarBase
SNP Report
Basic Infomation
Name
rs1867430  
dbSNP
Location
chr:12,41131515
Allele
T/C
LD-proxy of rSNPs(r
2
>0.8) (count: 13)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs1444203
0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1444204
0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1584093
0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1596509
0.93[EUR][1000 genomes]
rs4275691
0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56322620
1.00[ASN][1000 genomes]
rs6581931
0.93[EUR][1000 genomes]
rs73115378
1.00[ASN][1000 genomes]
rs73115394
1.00[ASN][1000 genomes]
rs73115401
1.00[ASN][1000 genomes]
rs73117512
1.00[ASN][1000 genomes]
rs7959703
0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs935230
0.93[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
CNTN1
Proximal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)