SNP Report
Name | rs17849707   dbSNP |
---|---|
Location | chr:2,65298839 |
Allele | A/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs1009358 | 0.89[CHD][hapmap];0.89[ASN][1000 genomes] |
rs1009360 | 0.86[CHD][hapmap];0.88[ASN][1000 genomes] |
rs10185243 | 0.92[CHD][hapmap];0.91[ASN][1000 genomes] |
rs1050676 | 0.93[ASN][1000 genomes] |
rs1055903 | 0.94[ASN][1000 genomes] |
rs11126028 | 0.94[CHD][hapmap];0.93[ASN][1000 genomes] |
rs11126029 | 0.93[ASN][1000 genomes] |
rs11893423 | 0.90[ASN][1000 genomes] |
rs1228 | 0.94[CHD][hapmap];0.95[ASN][1000 genomes] |
rs12465024 | 0.92[ASN][1000 genomes] |
rs12472718 | 0.93[ASN][1000 genomes] |
rs12621608 | 0.88[CEU][hapmap];0.97[CHD][hapmap];0.89[GIH][hapmap];0.89[MEX][hapmap];0.89[AMR][1000 genomes];0.97[ASN][1000 genomes] |
rs12713532 | 0.91[ASN][1000 genomes] |
rs12990465 | 0.90[ASN][1000 genomes] |
rs13005414 | 0.94[ASN][1000 genomes] |
rs13006381 | 0.88[ASN][1000 genomes] |
rs13421845 | 0.92[ASN][1000 genomes] |
rs1420183 | 0.94[CHD][hapmap];0.95[ASN][1000 genomes] |
rs1420184 | 0.95[ASN][1000 genomes] |
rs1420185 | 0.94[CHD][hapmap];0.94[ASN][1000 genomes] |
rs17040050 | 0.94[ASN][1000 genomes] |
rs2052261 | 0.92[CHD][hapmap];0.92[ASN][1000 genomes] |
rs2080385 | 0.88[AMR][1000 genomes];0.80[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs2241160 | 0.94[CHD][hapmap];0.93[ASN][1000 genomes] |
rs2241161 | 0.94[CHD][hapmap];0.93[ASN][1000 genomes] |
rs2249105 | 0.94[CHD][hapmap];0.94[ASN][1000 genomes] |
rs2252867 | 0.94[CHD][hapmap];0.98[ASN][1000 genomes] |
rs2302631 | 0.94[CHD][hapmap];0.94[ASN][1000 genomes] |
rs2302647 | 0.89[CHD][hapmap];0.94[GIH][hapmap];0.89[MEX][hapmap];0.81[AMR][1000 genomes];0.89[ASN][1000 genomes] |
rs2422436 | 0.92[ASN][1000 genomes] |
rs2422437 | 0.82[CHB][hapmap];0.85[CHD][hapmap];0.82[ASN][1000 genomes] |
rs2540945 | 0.94[ASN][1000 genomes] |
rs2540948 | 0.90[ASN][1000 genomes] |
rs2540949 | 0.90[ASN][1000 genomes] |
rs2540950 | 0.89[CHD][hapmap];0.89[ASN][1000 genomes] |
rs2540951 | 0.89[ASN][1000 genomes] |
rs2723062 | 0.89[ASN][1000 genomes] |
rs2723063 | 0.89[ASN][1000 genomes] |
rs2723064 | 0.89[ASN][1000 genomes] |
rs2723065 | 0.89[ASN][1000 genomes] |
rs2723066 | 0.89[ASN][1000 genomes] |
rs2723082 | 0.93[ASN][1000 genomes] |
rs2723083 | 0.92[ASN][1000 genomes] |
rs2723085 | 0.97[ASN][1000 genomes] |
rs2723086 | 0.99[ASN][1000 genomes] |
rs2723087 | 0.99[ASN][1000 genomes] |
rs2723091 | 0.97[CHD][hapmap];0.96[ASN][1000 genomes] |
rs2901749 | 0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs3732096 | 0.81[CHD][hapmap];0.81[ASN][1000 genomes] |
rs4671116 | 0.93[ASN][1000 genomes] |
rs4671117 | 0.89[ASN][1000 genomes] |
rs60136636 | 0.92[ASN][1000 genomes] |
rs6546123 | 0.92[ASN][1000 genomes] |
rs6546124 | 0.92[ASN][1000 genomes] |
rs6546125 | 0.83[CEU][hapmap];0.94[CHD][hapmap];0.92[GIH][hapmap];0.89[MEX][hapmap];0.91[AMR][1000 genomes];0.95[ASN][1000 genomes] |
rs6713746 | 0.94[ASN][1000 genomes] |
rs6728523 | 0.81[AMR][1000 genomes];0.90[ASN][1000 genomes] |
rs6730986 | 0.91[ASN][1000 genomes] |
rs6736728 | 0.94[CHD][hapmap];0.95[ASN][1000 genomes] |
rs6736982 | 0.92[ASN][1000 genomes] |
rs6741255 | 0.94[ASN][1000 genomes] |
rs6756585 | 0.93[ASN][1000 genomes] |
rs71424153 | 0.89[ASN][1000 genomes] |
rs74181299 | 0.89[ASN][1000 genomes] |
rs7559813 | 0.89[CHD][hapmap];0.97[GIH][hapmap];0.89[MEX][hapmap];0.89[ASN][1000 genomes] |
rs7563866 | 0.91[ASN][1000 genomes] |
rs7572857 | 0.81[TSI][hapmap] |
rs7579489 | 0.93[ASN][1000 genomes] |
rs7590690 | 0.94[ASN][1000 genomes] |
rs9797989 | 0.93[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
CEP68 | Proximal transcriptional regulation |
CEP68 | Distal transcriptional regulation |
CEP68 | RNA binding protein mediated regulation |
RAB1A | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014