SNP Report
Name | rs17489295   dbSNP |
---|---|
Location | chr:12,40447745 |
Allele | C/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs13377779 | 1.00[AMR][1000 genomes] |
rs17489170 | 1.00[AMR][1000 genomes] |
rs17489267 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs17489309 | 0.86[YRI][hapmap];0.80[AFR][1000 genomes] |
rs17489417 | 0.91[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs17489466 | 1.00[AMR][1000 genomes] |
rs17489522 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs17489583 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs17518141 | 1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs17518148 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs17518155 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs17518176 | 1.00[YRI][hapmap] |
rs17518190 | 1.00[AMR][1000 genomes] |
rs17518322 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs17518329 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs17518357 | 0.92[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs17518392 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs17518427 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs28370687 | 1.00[AMR][1000 genomes] |
rs28370691 | 1.00[AMR][1000 genomes] |
rs28370710 | 1.00[AMR][1000 genomes] |
rs28370715 | 1.00[AMR][1000 genomes] |
rs28370716 | 1.00[AMR][1000 genomes] |
rs28370749 | 1.00[AMR][1000 genomes] |
rs28370751 | 1.00[AMR][1000 genomes] |
rs28370760 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs28370763 | 0.84[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs28370769 | 0.90[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs28370775 | 0.86[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs28370781 | 0.92[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs28370782 | 0.86[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs28370787 | 0.86[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs28370788 | 1.00[AMR][1000 genomes] |
rs28370789 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs28370791 | 0.86[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs28740215 | 1.00[AMR][1000 genomes] |
rs28740216 | 1.00[AMR][1000 genomes] |
rs56193998 | 1.00[AMR][1000 genomes] |
rs57966079 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs58812092 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs59404097 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs59663144 | 1.00[AMR][1000 genomes] |
rs60755503 | 1.00[AMR][1000 genomes] |
rs61339615 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs74088130 | 1.00[AMR][1000 genomes] |
rs74088192 | 1.00[AMR][1000 genomes] |
rs74089321 | 1.00[AMR][1000 genomes] |
rs74091033 | 1.00[AMR][1000 genomes] |
Symbol | Regulation type |
---|---|
LRRK2 | Distal transcriptional regulation |
SLC2A13 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014