SNP Report

Basic Infomation

Name	rs17007164 dbSNP
Location	chr:2,61452502
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 30)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1017584	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1059541	0.97[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11647	0.80[EUR][1000 genomes]
rs17007967	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1823685	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2166720	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2839831	0.81[EUR][1000 genomes]
rs34606253	0.81[EUR][1000 genomes]
rs3856521	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3856522	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs56052101	0.92[AMR][1000 genomes];0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs59157557	0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6741734	0.95[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72809496	0.86[AFR][1000 genomes]
rs72811407	0.85[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs72811408	0.85[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs72811410	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs72811412	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs72811428	0.97[AMR][1000 genomes];0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72811447	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72811450	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72811469	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72813503	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs72813509	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72813556	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72813558	0.81[EUR][1000 genomes]
rs72813572	0.81[EUR][1000 genomes]
rs746032	0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7564507	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9653547	0.95[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
USP34	Proximal transcriptional regulation
USP34	Distal transcriptional regulation
AHSA2	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)