SNP Report
Basic Infomation
| Name | rs1692116 dbSNP |
|---|---|
| Location | chr:11,61409247 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 24)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11230758 | 1.00[ASN][1000 genomes] |
| rs11230766 | 1.00[JPT][hapmap] |
| rs11230767 | 1.00[JPT][hapmap] |
| rs11820769 | 1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes] |
| rs12421411 | 1.00[ASN][1000 genomes] |
| rs169167 | 1.00[JPT][hapmap] |
| rs1791796 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs198749 | 1.00[CHD][hapmap];1.00[JPT][hapmap] |
| rs198750 | 1.00[JPT][hapmap] |
| rs198755 | 1.00[CHD][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes] |
| rs198756 | 1.00[CHD][hapmap];1.00[JPT][hapmap] |
| rs2453710 | 0.87[CHD][hapmap] |
| rs66905042 | 0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs67140840 | 0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73481334 | 0.89[ASN][1000 genomes] |
| rs73481341 | 0.89[ASN][1000 genomes] |
| rs73481344 | 0.89[ASN][1000 genomes] |
| rs73481346 | 0.89[ASN][1000 genomes] |
| rs73481347 | 0.89[ASN][1000 genomes] |
| rs73481350 | 0.95[ASN][1000 genomes] |
| rs73481354 | 1.00[ASN][1000 genomes] |
| rs73481356 | 1.00[ASN][1000 genomes] |
| rs73481368 | 1.00[ASN][1000 genomes] |
| rs73481372 | 0.95[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| RPLP0P2 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014