SNP Report
Basic Infomation
| Name | rs1791796 dbSNP |
|---|---|
| Location | chr:11,61409958 |
| Allele | T/C |
LD-proxy of rSNPs(r2>0.8) (count: 17)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11230758 | 1.00[ASN][1000 genomes] |
| rs11820769 | 1.00[ASN][1000 genomes] |
| rs12421411 | 1.00[ASN][1000 genomes] |
| rs1692116 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs198755 | 0.89[ASN][1000 genomes] |
| rs66905042 | 0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs67140840 | 0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73481334 | 0.89[ASN][1000 genomes] |
| rs73481341 | 0.89[ASN][1000 genomes] |
| rs73481344 | 0.89[ASN][1000 genomes] |
| rs73481346 | 0.89[ASN][1000 genomes] |
| rs73481347 | 0.89[ASN][1000 genomes] |
| rs73481350 | 0.95[ASN][1000 genomes] |
| rs73481354 | 1.00[ASN][1000 genomes] |
| rs73481356 | 1.00[ASN][1000 genomes] |
| rs73481368 | 1.00[ASN][1000 genomes] |
| rs73481372 | 0.95[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| CPSF7 | Distal transcriptional regulation |
| SDHAF2 | Distal transcriptional regulation |
| ENSG00000256591 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014