SNP Report

Basic Infomation

Name	rs16884705 dbSNP
Location	chr:6,21223285
Allele	A/T

LD-proxy of rSNPs(r²>0.8) (count: 40)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11964983	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16884681	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16884685	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16884693	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16884699	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16884709	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16884713	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs169293	1.00[ASN][1000 genomes]
rs201287	1.00[ASN][1000 genomes]
rs201288	1.00[ASN][1000 genomes]
rs201290	1.00[ASN][1000 genomes]
rs201291	1.00[ASN][1000 genomes]
rs201294	1.00[ASN][1000 genomes]
rs201297	1.00[ASN][1000 genomes]
rs201303	1.00[ASN][1000 genomes]
rs201304	1.00[ASN][1000 genomes]
rs201305	1.00[ASN][1000 genomes]
rs201306	1.00[ASN][1000 genomes]
rs201307	1.00[ASN][1000 genomes]
rs201308	1.00[ASN][1000 genomes]
rs201309	1.00[ASN][1000 genomes]
rs201310	1.00[ASN][1000 genomes]
rs201315	1.00[ASN][1000 genomes]
rs201328	1.00[ASN][1000 genomes]
rs201330	1.00[ASN][1000 genomes]
rs2494729	1.00[ASN][1000 genomes]
rs364334	1.00[ASN][1000 genomes]
rs62403408	1.00[ASN][1000 genomes]
rs62404466	1.00[ASN][1000 genomes]
rs62404499	1.00[ASN][1000 genomes]
rs73387991	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73387996	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73387998	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73387999	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73388001	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73388002	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73389904	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73389907	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73389909	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73389911	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)